miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17983	+	18788	85	19.5	-21.6	NP_813772		5' arm      3' arm
17984	+	19271	90	19.5	-20.4	NP_813773		5' arm      3' arm
17985	+	22311	88	19.5	-23.2	NP_813776		5' arm      3' arm
17986	+	25095	87	21	-22.3	NP_813778		5' arm      3' arm
17987	+	25824	89	21.5	-22.2	NP_813779		5' arm      3' arm
17988	+	28537	90	21.5	-25.2	NP_813780		5' arm      3' arm
17989	+	30055	90	19	-22.9	NP_813780		5' arm      3' arm
17990	+	31393	90	21	-19.6	NP_813780		5' arm      3' arm
17991	+	33727	88	21.5	-20.5	NP_813782		5' arm      3' arm
17992	+	36989	89	21	-27.7			5' arm      3' arm
17993	+	37200	89	22	-22.3			5' arm      3' arm
17994	-	528	82	22.5	-26.4			5' arm      3' arm
17995	-	1075	90	23	-20.3			5' arm      3' arm
17996	-	2058	85	22.5	-20	NP_813747		5' arm      3' arm
17997	-	2253	89	19.5	-28.52	NP_813747		5' arm      3' arm
17998	-	2570	85	24.5	-24.6	NP_813747		5' arm      3' arm
17999	-	2913	88	20	-22.4	NP_813747		5' arm      3' arm
18000	-	3238	87	19	-23.69	NP_813747		5' arm      3' arm
18001	-	3836	89	26	-26.4	NP_813748		5' arm      3' arm
18002	-	3967	78	21	-25.02	NP_813749		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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