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| GenBank Identifier | RefSeq Acc. | Name |
| 29366701 | NC_004665.1 | Pseudomonas phage gh-1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 17971 | + | 5199 | 90 | 21 | -21 | NP_813751 | 5' arm 3' arm | ||
| 18004 | - | 4592 | 83 | 23.5 | -22.3 | NP_813751 | 5' arm 3' arm | ||
| 17973 | + | 6463 | 89 | 23 | -27.1 | NP_813752 | 5' arm 3' arm | ||
| 17972 | + | 6023 | 90 | 20.5 | -24.6 | NP_813753 | 5' arm 3' arm | ||
| 18005 | - | 6492 | 86 | 19 | -26 | NP_813753 | 5' arm 3' arm | ||
| 18006 | - | 7240 | 88 | 21.5 | -21.1 | NP_813755 | 5' arm 3' arm | ||
| 18007 | - | 8114 | 89 | 21 | -21.1 | NP_813757 | 5' arm 3' arm | ||
| 18008 | - | 8829 | 88 | 21 | -23.2 | NP_813758 | 5' arm 3' arm | ||
| 17975 | + | 9312 | 86 | 25 | -28.7 | NP_813759 | 5' arm 3' arm | ||
| 17974 | + | 8954 | 90 | 25.5 | -21.5 | NP_813759 | 5' arm 3' arm | ||
| 18009 | - | 9811 | 87 | 19.5 | -20 | NP_813760 | 5' arm 3' arm | ||
| 17976 | + | 9756 | 90 | 20 | -19.8 | NP_813760 | 5' arm 3' arm | ||
| 18010 | - | 11701 | 90 | 19 | -21.9 | NP_813762 | 5' arm 3' arm | ||
| 18011 | - | 12011 | 90 | 19.5 | -19.5 | NP_813763 | 5' arm 3' arm | ||
| 18012 | - | 13688 | 85 | 19 | -23.4 | NP_813764 | 5' arm 3' arm | ||
| 17978 | + | 13670 | 88 | 19 | -23.8 | NP_813764 | 5' arm 3' arm | ||
| 17977 | + | 12667 | 90 | 22.5 | -21.4 | NP_813764 | 5' arm 3' arm | ||
| 17979 | + | 14880 | 88 | 19 | -22.3 | NP_813766 | 5' arm 3' arm | ||
| 18013 | - | 15964 | 88 | 21.5 | -20.5 | NP_813767 | 5' arm 3' arm | ||
| 17980 | + | 17059 | 89 | 20.5 | -24.5 | NP_813771 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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