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| GenBank Identifier | RefSeq Acc. | Name |
| 29366701 | NC_004665.1 | Pseudomonas phage gh-1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 18021 | - | 23071 | 87 | 23 | -22.2 | NP_813776 | 5' arm 3' arm | ||
| 18018 | - | 21237 | 89 | 20.5 | -24.2 | NP_813775 | 5' arm 3' arm | ||
| 18017 | - | 21064 | 90 | 21 | -20.3 | NP_813774 | 5' arm 3' arm | ||
| 18016 | - | 20700 | 90 | 20.5 | -21.9 | NP_813774 | 5' arm 3' arm | ||
| 17984 | + | 19271 | 90 | 19.5 | -20.4 | NP_813773 | 5' arm 3' arm | ||
| 18014 | - | 19658 | 85 | 20.5 | -19.8 | NP_813773 | 5' arm 3' arm | ||
| 18015 | - | 19805 | 88 | 20 | -23.8 | NP_813773 | 5' arm 3' arm | ||
| 17981 | + | 17964 | 90 | 22.5 | -23.5 | NP_813772 | 5' arm 3' arm | ||
| 17982 | + | 18200 | 89 | 21.5 | -20.9 | NP_813772 | 5' arm 3' arm | ||
| 17983 | + | 18788 | 85 | 19.5 | -21.6 | NP_813772 | 5' arm 3' arm | ||
| 17980 | + | 17059 | 89 | 20.5 | -24.5 | NP_813771 | 5' arm 3' arm | ||
| 18013 | - | 15964 | 88 | 21.5 | -20.5 | NP_813767 | 5' arm 3' arm | ||
| 17979 | + | 14880 | 88 | 19 | -22.3 | NP_813766 | 5' arm 3' arm | ||
| 17977 | + | 12667 | 90 | 22.5 | -21.4 | NP_813764 | 5' arm 3' arm | ||
| 17978 | + | 13670 | 88 | 19 | -23.8 | NP_813764 | 5' arm 3' arm | ||
| 18012 | - | 13688 | 85 | 19 | -23.4 | NP_813764 | 5' arm 3' arm | ||
| 18011 | - | 12011 | 90 | 19.5 | -19.5 | NP_813763 | 5' arm 3' arm | ||
| 18010 | - | 11701 | 90 | 19 | -21.9 | NP_813762 | 5' arm 3' arm | ||
| 18009 | - | 9811 | 87 | 19.5 | -20 | NP_813760 | 5' arm 3' arm | ||
| 17976 | + | 9756 | 90 | 20 | -19.8 | NP_813760 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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