miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17994	-	528	82	22.5	-26.4			5' arm      3' arm
17970	+	4952	89	21	-27	NP_813751		5' arm      3' arm
17968	+	3525	90	22.5	-22	NP_813747		5' arm      3' arm
17963	+	57	89	22	-22.3			5' arm      3' arm
17965	+	445	89	22	-26.1			5' arm      3' arm
17966	+	1830	89	21	-25.1	NP_813747		5' arm      3' arm
17967	+	3047	90	21	-23.3	NP_813747		5' arm      3' arm
17969	+	4387	86	19.5	-25.3	NP_813750		5' arm      3' arm
17974	+	8954	90	25.5	-21.5	NP_813759		5' arm      3' arm
17975	+	9312	86	25	-28.7	NP_813759		5' arm      3' arm
17973	+	6463	89	23	-27.1	NP_813752		5' arm      3' arm
17964	+	157	90	23.5	-29.4			5' arm      3' arm
17971	+	5199	90	21	-21	NP_813751		5' arm      3' arm
17972	+	6023	90	20.5	-24.6	NP_813753		5' arm      3' arm
17977	+	12667	90	22.5	-21.4	NP_813764		5' arm      3' arm
17976	+	9756	90	20	-19.8	NP_813760		5' arm      3' arm
17978	+	13670	88	19	-23.8	NP_813764		5' arm      3' arm
17981	+	17964	90	22.5	-23.5	NP_813772		5' arm      3' arm
17982	+	18200	89	21.5	-20.9	NP_813772		5' arm      3' arm
17980	+	17059	89	20.5	-24.5	NP_813771		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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