miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18012	-	13688	85	19	-23.4	NP_813764		5' arm      3' arm
18011	-	12011	90	19.5	-19.5	NP_813763		5' arm      3' arm
18010	-	11701	90	19	-21.9	NP_813762		5' arm      3' arm
18009	-	9811	87	19.5	-20	NP_813760		5' arm      3' arm
18008	-	8829	88	21	-23.2	NP_813758		5' arm      3' arm
18007	-	8114	89	21	-21.1	NP_813757		5' arm      3' arm
18006	-	7240	88	21.5	-21.1	NP_813755		5' arm      3' arm
18005	-	6492	86	19	-26	NP_813753		5' arm      3' arm
18004	-	4592	83	23.5	-22.3	NP_813751		5' arm      3' arm
18003	-	4490	90	21	-24.6	NP_813750		5' arm      3' arm
18002	-	3967	78	21	-25.02	NP_813749		5' arm      3' arm
18001	-	3836	89	26	-26.4	NP_813748		5' arm      3' arm
18000	-	3238	87	19	-23.69	NP_813747		5' arm      3' arm
17999	-	2913	88	20	-22.4	NP_813747		5' arm      3' arm
17998	-	2570	85	24.5	-24.6	NP_813747		5' arm      3' arm
17997	-	2253	89	19.5	-28.52	NP_813747		5' arm      3' arm
17996	-	2058	85	22.5	-20	NP_813747		5' arm      3' arm
17995	-	1075	90	23	-20.3			5' arm      3' arm
17994	-	528	82	22.5	-26.4			5' arm      3' arm
17993	+	37200	89	22	-22.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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