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| GenBank Identifier | RefSeq Acc. | Name |
| 29366701 | NC_004665.1 | Pseudomonas phage gh-1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 18000 | - | 3238 | 87 | 19 | -23.69 | NP_813747 | 5' arm 3' arm | ||
| 17979 | + | 14880 | 88 | 19 | -22.3 | NP_813766 | 5' arm 3' arm | ||
| 18010 | - | 11701 | 90 | 19 | -21.9 | NP_813762 | 5' arm 3' arm | ||
| 18026 | - | 29171 | 87 | 19 | -23.4 | NP_813780 | 5' arm 3' arm | ||
| 17978 | + | 13670 | 88 | 19 | -23.8 | NP_813764 | 5' arm 3' arm | ||
| 17989 | + | 30055 | 90 | 19 | -22.9 | NP_813780 | 5' arm 3' arm | ||
| 18005 | - | 6492 | 86 | 19 | -26 | NP_813753 | 5' arm 3' arm | ||
| 18012 | - | 13688 | 85 | 19 | -23.4 | NP_813764 | 5' arm 3' arm | ||
| 17984 | + | 19271 | 90 | 19.5 | -20.4 | NP_813773 | 5' arm 3' arm | ||
| 17985 | + | 22311 | 88 | 19.5 | -23.2 | NP_813776 | 5' arm 3' arm | ||
| 17969 | + | 4387 | 86 | 19.5 | -25.3 | NP_813750 | 5' arm 3' arm | ||
| 17997 | - | 2253 | 89 | 19.5 | -28.52 | NP_813747 | 5' arm 3' arm | ||
| 18011 | - | 12011 | 90 | 19.5 | -19.5 | NP_813763 | 5' arm 3' arm | ||
| 18025 | - | 29005 | 88 | 19.5 | -21.9 | NP_813780 | 5' arm 3' arm | ||
| 18031 | - | 35195 | 89 | 19.5 | -25.8 | NP_813786 | 5' arm 3' arm | ||
| 18009 | - | 9811 | 87 | 19.5 | -20 | NP_813760 | 5' arm 3' arm | ||
| 17983 | + | 18788 | 85 | 19.5 | -21.6 | NP_813772 | 5' arm 3' arm | ||
| 17999 | - | 2913 | 88 | 20 | -22.4 | NP_813747 | 5' arm 3' arm | ||
| 18019 | - | 21866 | 86 | 20 | -21.4 | NP_813776 | 5' arm 3' arm | ||
| 17976 | + | 9756 | 90 | 20 | -19.8 | NP_813760 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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