miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17965	+	445	89	22	-26.1			5' arm      3' arm
17993	+	37200	89	22	-22.3			5' arm      3' arm
17991	+	33727	88	21.5	-20.5	NP_813782		5' arm      3' arm
17988	+	28537	90	21.5	-25.2	NP_813780		5' arm      3' arm
17987	+	25824	89	21.5	-22.2	NP_813779		5' arm      3' arm
17982	+	18200	89	21.5	-20.9	NP_813772		5' arm      3' arm
18013	-	15964	88	21.5	-20.5	NP_813767		5' arm      3' arm
18006	-	7240	88	21.5	-21.1	NP_813755		5' arm      3' arm
18003	-	4490	90	21	-24.6	NP_813750		5' arm      3' arm
17990	+	31393	90	21	-19.6	NP_813780		5' arm      3' arm
17992	+	36989	89	21	-27.7			5' arm      3' arm
17971	+	5199	90	21	-21	NP_813751		5' arm      3' arm
17970	+	4952	89	21	-27	NP_813751		5' arm      3' arm
18030	-	34639	83	21	-20.7	NP_813785		5' arm      3' arm
18007	-	8114	89	21	-21.1	NP_813757		5' arm      3' arm
18002	-	3967	78	21	-25.02	NP_813749		5' arm      3' arm
17967	+	3047	90	21	-23.3	NP_813747		5' arm      3' arm
17966	+	1830	89	21	-25.1	NP_813747		5' arm      3' arm
18008	-	8829	88	21	-23.2	NP_813758		5' arm      3' arm
18017	-	21064	90	21	-20.3	NP_813774		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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