miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16563	+	5321	88	21.5	-21.4	NP_689179		5' arm      3' arm
16564	+	16237	88	23	-23.3	NP_689190		5' arm      3' arm
16565	+	18102	90	19	-26.7	NP_689193		5' arm      3' arm
16566	+	19057	86	21.5	-19.4	NP_689194		5' arm      3' arm
16567	+	19263	90	19.5	-22.4	NP_689194		5' arm      3' arm
16568	+	19622	89	21.5	-21	NP_689194		5' arm      3' arm
16569	+	19904	86	24	-28.2	NP_689194		5' arm      3' arm
16570	+	57819	88	26	-20.5	NP_689236		5' arm      3' arm
16571	+	57991	87	22	-19.6	NP_689236		5' arm      3' arm
16572	+	59092	88	23	-22.7	NP_689238		5' arm      3' arm
16573	+	67701	90	20	-24.4	NP_689248		5' arm      3' arm
16574	+	75187	90	27	-21.7	NP_689256		5' arm      3' arm
16575	+	96247	90	22	-22.8	NP_689275		5' arm      3' arm
16576	+	97790	86	28	-26.7	NP_689277		5' arm      3' arm
16577	+	146954	88	20.5	-22	NP_689331		5' arm      3' arm
16578	-	6006	90	20.5	-22.9	NP_689180		5' arm      3' arm
16579	-	7434	89	21	-23.34	NP_689181		5' arm      3' arm
16580	-	18323	86	22	-26.4			5' arm      3' arm
16581	-	19810	88	21	-23.3	NP_689194		5' arm      3' arm
16582	-	31549	89	22	-21.8	NP_689206		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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