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GenBank Identifier | RefSeq Acc. | Name |
29566108 | NC_004683.1 | Mycobacteriophage Che9c virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
18750 | + | 562 | 88 | 24 | -32.3 | NP_817679 | 5' arm 3' arm | ||
18751 | + | 900 | 88 | 22.5 | -20.5 | NP_817679 | 5' arm 3' arm | ||
18752 | + | 1076 | 88 | 20.5 | -19.6 | NP_817679 | 5' arm 3' arm | ||
18753 | + | 1307 | 88 | 20 | -21.5 | NP_817679 | 5' arm 3' arm | ||
18754 | + | 1609 | 82 | 19.5 | -19.74 | NP_817679 | 5' arm 3' arm | ||
18755 | + | 2219 | 90 | 23.5 | -24.3 | 5' arm 3' arm | |||
18756 | + | 2480 | 89 | 23.5 | -21 | NP_817681 | 5' arm 3' arm | ||
18757 | + | 2647 | 89 | 22.5 | -20.2 | NP_817681 | 5' arm 3' arm | ||
18758 | + | 2772 | 90 | 22.5 | -19.4 | NP_817681 | 5' arm 3' arm | ||
18759 | + | 3999 | 90 | 20 | -24.3 | NP_817682 | 5' arm 3' arm | ||
18760 | + | 4261 | 90 | 21.5 | -25.4 | NP_817682 | 5' arm 3' arm | ||
18761 | + | 5766 | 89 | 20 | -30.8 | NP_817683 | 5' arm 3' arm | ||
18762 | + | 6089 | 89 | 21.5 | -23.3 | NP_817683 | 5' arm 3' arm | ||
18763 | + | 6691 | 90 | 26.5 | -29.3 | NP_817685 | 5' arm 3' arm | ||
18764 | + | 6893 | 90 | 21.5 | -32.1 | NP_817685 | 5' arm 3' arm | ||
18765 | + | 8914 | 87 | 19 | -26.7 | NP_817689 | 5' arm 3' arm | ||
18766 | + | 10329 | 87 | 20.5 | -24.3 | NP_817692 | 5' arm 3' arm | ||
18767 | + | 10704 | 90 | 22.5 | -22.8 | NP_817692 | 5' arm 3' arm | ||
18768 | + | 10946 | 90 | 19.5 | -24.7 | NP_817692 | 5' arm 3' arm | ||
18769 | + | 11108 | 89 | 19 | -19.7 | NP_817692 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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