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GenBank Identifier | RefSeq Acc. | Name |
29566284 | NC_004685.1 | Mycobacteriophage Corndog virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
19263 | + | 76 | 87 | 19 | -20.5 | 5' arm 3' arm | |||
19264 | + | 220 | 87 | 19.5 | -19.7 | NP_817852 | 5' arm 3' arm | ||
19265 | + | 427 | 89 | 24.5 | -27.7 | NP_817853 | 5' arm 3' arm | ||
19266 | + | 1071 | 87 | 23.5 | -24.7 | NP_817856 | 5' arm 3' arm | ||
19267 | + | 1278 | 90 | 21 | -22.4 | NP_817856 | 5' arm 3' arm | ||
19268 | + | 1383 | 86 | 20 | -23.2 | 5' arm 3' arm | |||
19269 | + | 1508 | 90 | 20 | -25.1 | NP_817856 | 5' arm 3' arm | ||
19270 | + | 1842 | 90 | 23.5 | -28.7 | NP_817857 | 5' arm 3' arm | ||
19271 | + | 2540 | 90 | 25 | -23.21 | NP_817859 | 5' arm 3' arm | ||
19272 | + | 2648 | 87 | 20.5 | -20.8 | NP_817859 | 5' arm 3' arm | ||
19273 | + | 3101 | 87 | 21.5 | -26.4 | NP_817861 | 5' arm 3' arm | ||
19274 | + | 3321 | 87 | 21.5 | -28.6 | NP_817862 | 5' arm 3' arm | ||
19275 | + | 3413 | 88 | 22.5 | -22.3 | NP_817862 | 5' arm 3' arm | ||
19276 | + | 4103 | 88 | 19 | -20.6 | NP_817863 | 5' arm 3' arm | ||
19277 | + | 4191 | 85 | 21.5 | -21.1 | NP_817863 | 5' arm 3' arm | ||
19278 | + | 4310 | 89 | 22 | -20.3 | NP_817863 | 5' arm 3' arm | ||
19279 | + | 4554 | 90 | 22 | -25.6 | 5' arm 3' arm | |||
19280 | + | 4759 | 89 | 19.5 | -27.5 | 5' arm 3' arm | |||
19281 | + | 5632 | 85 | 19.5 | -20.5 | NP_817866 | 5' arm 3' arm | ||
19282 | + | 6632 | 89 | 19 | -24.6 | NP_817868 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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