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GenBank Identifier | RefSeq Acc. | Name |
29566407 | NC_004686.1 | Mycobacteriophage Che9d virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
19554 | + | 122 | 89 | 23 | -26.9 | NP_817974 | 5' arm 3' arm | ||
19555 | + | 597 | 90 | 21.5 | -23.6 | NP_817975 | 5' arm 3' arm | ||
19556 | + | 1319 | 90 | 22.5 | -22 | NP_817976 | 5' arm 3' arm | ||
19557 | + | 2361 | 86 | 22 | -26.7 | NP_817977 | 5' arm 3' arm | ||
19558 | + | 2779 | 90 | 22 | -29.7 | NP_817977 | 5' arm 3' arm | ||
19559 | + | 3009 | 89 | 19 | -21 | NP_817977 | 5' arm 3' arm | ||
19560 | + | 3257 | 90 | 20.5 | -25.8 | NP_817977 | 5' arm 3' arm | ||
19561 | + | 3399 | 87 | 21.5 | -20.7 | NP_817977 | 5' arm 3' arm | ||
19562 | + | 4560 | 90 | 20 | -23.1 | NP_817979 | 5' arm 3' arm | ||
19563 | + | 6341 | 89 | 22 | -19.5 | NP_817982 | 5' arm 3' arm | ||
19564 | + | 6969 | 90 | 19 | -23.8 | NP_817985 | 5' arm 3' arm | ||
19565 | + | 7100 | 89 | 20.5 | -35.4 | NP_817985 | 5' arm 3' arm | ||
19566 | + | 8418 | 90 | 20 | -27.2 | NP_817988 | 5' arm 3' arm | ||
19567 | + | 8750 | 88 | 21.5 | -23.7 | NP_817988 | 5' arm 3' arm | ||
19568 | + | 8840 | 90 | 19.5 | -28.4 | NP_817988 | 5' arm 3' arm | ||
19569 | + | 9293 | 88 | 22 | -22.1 | NP_817990 | 5' arm 3' arm | ||
19570 | + | 9956 | 83 | 19.5 | -19.9 | NP_817990 | 5' arm 3' arm | ||
19571 | + | 10371 | 90 | 22.5 | -22.5 | NP_817990 | 5' arm 3' arm | ||
19572 | + | 10485 | 90 | 21 | -20.3 | NP_817990 | 5' arm 3' arm | ||
19573 | + | 11136 | 90 | 24.5 | -32 | NP_817990 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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