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GenBank Identifier | RefSeq Acc. | Name |
27311175 | NC_004456.1 | Vibrio harveyi bacteriophage VHML |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
17468 | + | 3113 | 87 | 21 | -22.8 | NP_758897 | 5' arm 3' arm | ||
17469 | + | 6592 | 90 | 19 | -20 | NP_758899 | 5' arm 3' arm | ||
17470 | + | 7338 | 87 | 23 | -22.5 | NP_758900 | 5' arm 3' arm | ||
17471 | + | 7730 | 79 | 21.5 | -25.5 | NP_758900 | 5' arm 3' arm | ||
17472 | + | 11893 | 86 | 23.5 | -20.9 | NP_758908 | 5' arm 3' arm | ||
17473 | + | 12417 | 89 | 21 | -23.8 | 5' arm 3' arm | |||
17474 | + | 15179 | 87 | 21.5 | -32.9 | 5' arm 3' arm | |||
17475 | + | 16534 | 89 | 21.5 | -20.5 | NP_758915 | 5' arm 3' arm | ||
17476 | + | 17307 | 90 | 20.5 | -24.5 | NP_758915 | 5' arm 3' arm | ||
17477 | + | 19288 | 89 | 20 | -20.5 | NP_758916 | 5' arm 3' arm | ||
17478 | + | 19709 | 87 | 20.5 | -20.9 | NP_758917 | 5' arm 3' arm | ||
17479 | + | 20158 | 85 | 19.5 | -25.6 | NP_758917 | 5' arm 3' arm | ||
17480 | + | 20422 | 90 | 19.5 | -20.7 | NP_758917 | 5' arm 3' arm | ||
17481 | + | 20739 | 86 | 20 | -20.8 | NP_758917 | 5' arm 3' arm | ||
17482 | + | 24494 | 88 | 19.5 | -23.5 | 5' arm 3' arm | |||
17483 | + | 25325 | 87 | 24 | -26.9 | NP_758925 | 5' arm 3' arm | ||
17484 | + | 25442 | 90 | 22.5 | -20.9 | NP_758925 | 5' arm 3' arm | ||
17485 | + | 26753 | 84 | 21 | -23.4 | NP_758927 | 5' arm 3' arm | ||
17486 | + | 27501 | 90 | 21.5 | -20.8 | NP_758928 | 5' arm 3' arm | ||
17487 | + | 28196 | 89 | 21.5 | -19.8 | NP_758928 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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