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| GenBank Identifier | RefSeq Acc. | Name |
| 27311175 | NC_004456.1 | Vibrio harveyi bacteriophage VHML |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 17488 | + | 34178 | 89 | 21.5 | -25.2 | NP_758934 | 5' arm 3' arm | ||
| 17502 | - | 15903 | 89 | 23 | -25.2 | NP_758914 | 5' arm 3' arm | ||
| 17471 | + | 7730 | 79 | 21.5 | -25.5 | NP_758900 | 5' arm 3' arm | ||
| 17479 | + | 20158 | 85 | 19.5 | -25.6 | NP_758917 | 5' arm 3' arm | ||
| 17503 | - | 17870 | 89 | 22.5 | -26.4 | NP_758915 | 5' arm 3' arm | ||
| 17483 | + | 25325 | 87 | 24 | -26.9 | NP_758925 | 5' arm 3' arm | ||
| 17507 | - | 20958 | 79 | 19.5 | -27 | NP_758917 | 5' arm 3' arm | ||
| 17504 | - | 18474 | 89 | 20.5 | -27.3 | NP_758916 | 5' arm 3' arm | ||
| 17515 | - | 38512 | 90 | 20 | -28.3 | 5' arm 3' arm | |||
| 17474 | + | 15179 | 87 | 21.5 | -32.9 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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