miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16990	+	96	87	23.5	-21.5	NP_705629		5' arm      3' arm
16991	+	238	90	22	-21.1	NP_705629		5' arm      3' arm
16992	+	677	86	20.5	-27.2	NP_705629		5' arm      3' arm
16993	+	901	90	23	-25.6			5' arm      3' arm
16994	+	1099	89	20.5	-22.7	YP_022739		5' arm      3' arm
16995	+	1524	90	24.5	-21.6	NP_705630		5' arm      3' arm
16996	+	1628	89	20	-26.9	NP_705630		5' arm      3' arm
16997	+	1937	90	21	-19.5	NP_705631		5' arm      3' arm
16998	+	2046	90	19	-22.6	NP_705631		5' arm      3' arm
16999	+	2625	86	22	-25.7	NP_705631		5' arm      3' arm
17000	+	2729	89	22	-21.7	NP_705631		5' arm      3' arm
17001	+	2883	88	21	-20.4	NP_705631		5' arm      3' arm
17002	+	3619	87	22	-25.2	NP_705632		5' arm      3' arm
17003	+	3928	86	23.5	-28.2	YP_022740		5' arm      3' arm
17004	+	4201	90	22.5	-19.5	YP_022740		5' arm      3' arm
17005	+	5417	89	19.5	-23.5	NP_705635		5' arm      3' arm
17006	+	5531	89	20	-23.1	NP_705635		5' arm      3' arm
17007	+	5694	89	21	-30.9			5' arm      3' arm
17008	+	6297	87	19.5	-23.8	NP_705636		5' arm      3' arm
17009	+	7044	89	21.5	-23.8	NP_705637		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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