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| GenBank Identifier | RefSeq Acc. | Name |
| 47835019 | NC_004333.2 | Burkholderia cepacia phage Bcep781 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 17089 | + | 40325 | 88 | 19 | -24.04 | YP_022747 | 5' arm 3' arm | ||
| 17087 | + | 39549 | 85 | 25 | -20.3 | YP_022745 | 5' arm 3' arm | ||
| 17189 | - | 33427 | 85 | 20 | -25 | YP_022744 | 5' arm 3' arm | ||
| 17062 | + | 28521 | 88 | 19.5 | -29.5 | YP_022742 | 5' arm 3' arm | ||
| 17177 | - | 28462 | 88 | 20 | -25 | YP_022742 | 5' arm 3' arm | ||
| 17116 | - | 4825 | 90 | 20 | -22.8 | YP_022741 | 5' arm 3' arm | ||
| 17004 | + | 4201 | 90 | 22.5 | -19.5 | YP_022740 | 5' arm 3' arm | ||
| 17003 | + | 3928 | 86 | 23.5 | -28.2 | YP_022740 | 5' arm 3' arm | ||
| 17115 | - | 4366 | 89 | 20.5 | -25.6 | YP_022740 | 5' arm 3' arm | ||
| 17107 | - | 1178 | 88 | 19.5 | -24.2 | YP_022739 | 5' arm 3' arm | ||
| 16994 | + | 1099 | 89 | 20.5 | -22.7 | YP_022739 | 5' arm 3' arm | ||
| 17104 | + | 48030 | 90 | 23.5 | -25.9 | NP_705689 | 5' arm 3' arm | ||
| 17102 | + | 47727 | 90 | 19 | -20.6 | NP_705688 | 5' arm 3' arm | ||
| 17101 | + | 47597 | 90 | 21.5 | -24.7 | NP_705688 | 5' arm 3' arm | ||
| 17218 | - | 46920 | 89 | 21.5 | -24.1 | NP_705687 | 5' arm 3' arm | ||
| 17217 | - | 46806 | 90 | 23 | -21.9 | NP_705687 | 5' arm 3' arm | ||
| 17216 | - | 46227 | 88 | 19 | -25.7 | NP_705686 | 5' arm 3' arm | ||
| 17212 | - | 44895 | 90 | 22.5 | -23.7 | NP_705685 | 5' arm 3' arm | ||
| 17096 | + | 44807 | 88 | 20.5 | -21.43 | NP_705685 | 5' arm 3' arm | ||
| 17215 | - | 45814 | 83 | 23 | -23.5 | NP_705685 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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