miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22041	+	16839	90	20.5	-29.7	NP_861616		5' arm      3' arm
22042	+	18655	88	22	-30.6	NP_861618		5' arm      3' arm
22043	+	19698	89	23	-22	NP_861619		5' arm      3' arm
22044	+	20033	89	19.5	-25.9	NP_861619		5' arm      3' arm
22045	+	22189	90	19.5	-29.3	NP_861623		5' arm      3' arm
22046	+	22442	90	21	-26.2	NP_861624		5' arm      3' arm
22047	+	22892	88	19	-19.6	NP_861624		5' arm      3' arm
22048	+	24174	87	23.5	-27.7	NP_861625		5' arm      3' arm
22049	+	24458	83	20	-25.2	NP_861625		5' arm      3' arm
22050	+	25624	90	20	-24.5	NP_861626		5' arm      3' arm
22051	+	28312	90	21	-29.2	NP_861634		5' arm      3' arm
22052	+	28455	90	20.5	-20.1	NP_861634		5' arm      3' arm
22053	+	28713	85	20	-25.4	NP_861634		5' arm      3' arm
22054	+	29037	83	19	-21.6	NP_861634		5' arm      3' arm
22055	+	30601	90	19.5	-24.2	NP_861639		5' arm      3' arm
22056	+	31140	89	20	-30.6			5' arm      3' arm
22057	+	31573	77	20	-27.3	NP_861640		5' arm      3' arm
22058	+	32264	87	20	-23.2	NP_861642		5' arm      3' arm
22059	+	33249	90	19.5	-22.8	NP_861642		5' arm      3' arm
22060	+	33363	89	22	-29.1	NP_861642		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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