miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22021	+	568	89	19.5	-29.1			5' arm      3' arm
22120	-	21730	89	20.5	-28.9	NP_861622		5' arm      3' arm
22089	+	65961	84	19.5	-28.8	NP_861676		5' arm      3' arm
22037	+	14962	90	21	-28.5	NP_861613		5' arm      3' arm
22125	-	24456	90	21	-28.4	NP_861625		5' arm      3' arm
22106	-	5058	90	20	-28.1			5' arm      3' arm
22082	+	57302	88	20	-28.1	NP_861667		5' arm      3' arm
22048	+	24174	87	23.5	-27.7	NP_861625		5' arm      3' arm
22185	-	69098	87	21	-27.6	NP_861680		5' arm      3' arm
22131	-	28799	89	23	-27.4	NP_861634		5' arm      3' arm
22057	+	31573	77	20	-27.3	NP_861640		5' arm      3' arm
22154	-	52870	86	19.5	-27.2	NP_861661		5' arm      3' arm
22102	-	2559	88	20	-27.1	NP_861589		5' arm      3' arm
22107	-	6825	89	22	-27	NP_861601		5' arm      3' arm
22175	-	63933	88	20.5	-26.9	NP_861675		5' arm      3' arm
22135	-	32280	89	20.5	-26.7	NP_861642		5' arm      3' arm
22123	-	23733	90	20	-26.7	NP_861624		5' arm      3' arm
22109	-	8135	88	23.5	-26.7	NP_861603		5' arm      3' arm
22146	-	40858	87	20	-26.6			5' arm      3' arm
22172	-	61594	90	23	-26.6	NP_861672		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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