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GenBank Identifier | RefSeq Acc. | Name |
34610128 | NC_005091.1 | Burkholderia cepacia phage BcepNazgul |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22724 | - | 47568 | 88 | 23 | -25.7 | 5' arm 3' arm | |||
22734 | - | 56145 | 89 | 24 | -25.4 | 5' arm 3' arm | |||
22735 | - | 56334 | 90 | 23.5 | -22.3 | 5' arm 3' arm | |||
22730 | - | 53458 | 87 | 19 | -22.2 | 5' arm 3' arm | |||
22729 | - | 53058 | 89 | 25 | -31.2 | 5' arm 3' arm | |||
22739 | - | 57836 | 89 | 22.5 | -22.7 | 5' arm 3' arm | |||
22736 | - | 56961 | 88 | 21 | -24.2 | 5' arm 3' arm | |||
22731 | - | 54708 | 86 | 19 | -25.7 | 5' arm 3' arm | |||
22725 | - | 48580 | 75 | 23 | -20.1 | 5' arm 3' arm | |||
22722 | - | 45234 | 89 | 20.5 | -19.9 | 5' arm 3' arm | |||
22655 | - | 1567 | 86 | 20.5 | -23.1 | 5' arm 3' arm | |||
22733 | - | 55512 | 86 | 22 | -21 | 5' arm 3' arm | |||
22738 | - | 57601 | 88 | 22 | -24.1 | 5' arm 3' arm | |||
22727 | - | 49309 | 90 | 21 | -25.8 | 5' arm 3' arm | |||
22728 | - | 51268 | 89 | 19.5 | -22.3 | 5' arm 3' arm | |||
22737 | - | 57265 | 85 | 21 | -25 | 5' arm 3' arm | |||
22719 | - | 44227 | 90 | 21 | -23.7 | 5' arm 3' arm | |||
22721 | - | 44555 | 89 | 20 | -24.8 | 5' arm 3' arm | |||
22732 | - | 55008 | 88 | 19 | -22.6 | 5' arm 3' arm | |||
22726 | - | 48833 | 89 | 23.5 | -23.1 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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