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| GenBank Identifier | RefSeq Acc. | Name |
| 47777280 | NC_005263.2 | Burkholderia cenocepacia phage Bcep1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24293 | - | 27532 | 88 | 19 | -20.6 | NP_944347 | 5' arm 3' arm | ||
| 24224 | + | 43955 | 90 | 19 | -20.1 | NP_944374 | 5' arm 3' arm | ||
| 24295 | - | 28619 | 86 | 19.5 | -22.4 | NP_944349 | 5' arm 3' arm | ||
| 24165 | + | 20600 | 87 | 19.5 | -23.4 | NP_944335 | 5' arm 3' arm | ||
| 24172 | + | 24850 | 89 | 19.5 | -21.3 | NP_944343 | 5' arm 3' arm | ||
| 24261 | - | 10822 | 90 | 19.5 | -25.8 | NP_944323 | 5' arm 3' arm | ||
| 24164 | + | 19582 | 88 | 19.5 | -32.8 | NP_944332 | 5' arm 3' arm | ||
| 24139 | + | 10296 | 89 | 19.5 | -22.3 | NP_944323 | 5' arm 3' arm | ||
| 24143 | + | 11251 | 87 | 19.5 | -22.5 | NP_944325 | 5' arm 3' arm | ||
| 24318 | - | 42241 | 87 | 19.5 | -24.2 | NP_944368 | 5' arm 3' arm | ||
| 24198 | + | 33945 | 87 | 19.5 | -28.2 | NP_944359 | 5' arm 3' arm | ||
| 24208 | + | 37454 | 86 | 19.5 | -28.5 | NP_944363 | 5' arm 3' arm | ||
| 24269 | - | 14731 | 87 | 19.5 | -23.6 | NP_944327 | 5' arm 3' arm | ||
| 24301 | - | 31403 | 89 | 19.5 | -21.5 | NP_944354 | 5' arm 3' arm | ||
| 24123 | + | 5417 | 89 | 19.5 | -20 | NP_944317 | 5' arm 3' arm | ||
| 24126 | + | 6113 | 87 | 19.5 | -20 | NP_944318 | 5' arm 3' arm | ||
| 24127 | + | 6201 | 90 | 19.5 | -23.53 | NP_944318 | 5' arm 3' arm | ||
| 24129 | + | 7284 | 90 | 19.5 | -23.2 | NP_944320 | 5' arm 3' arm | ||
| 24223 | + | 42903 | 89 | 19.5 | -28.7 | NP_944370 | 5' arm 3' arm | ||
| 24220 | + | 41378 | 88 | 19.5 | -27.6 | NP_944368 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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