miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24922	-	15312	90	22.5	-19.4	NP_945048		5' arm      3' arm
24834	+	13806	90	21	-19.4	NP_945046		5' arm      3' arm
24913	-	10059	89	19	-19.4	NP_945044		5' arm      3' arm
24934	-	23843	90	22	-19.6	NP_945058		5' arm      3' arm
24948	-	34540	86	21.5	-19.7	NP_945075		5' arm      3' arm
24939	-	26771	89	20	-19.8	NP_945062		5' arm      3' arm
24954	-	39877	89	19.5	-19.82	NP_945088		5' arm      3' arm
24878	+	38787	87	23	-19.9	NP_945083		5' arm      3' arm
24856	+	25687	87	20.5	-19.9	NP_945061		5' arm      3' arm
24951	-	36677	84	19	-19.9			5' arm      3' arm
24945	-	31790	90	21.5	-20	NP_945070		5' arm      3' arm
24906	-	5830	90	20	-20.1			5' arm      3' arm
24971	-	54551	87	19	-20.2	NP_945113		5' arm      3' arm
24908	-	7096	89	21.5	-20.2	NP_945040		5' arm      3' arm
24813	+	6030	86	20.5	-20.2	NP_945037		5' arm      3' arm
24831	+	12437	89	21	-20.2	NP_945044		5' arm      3' arm
24907	-	5967	89	21.5	-20.2	NP_945037		5' arm      3' arm
24845	+	18125	89	19	-20.2	NP_945050		5' arm      3' arm
24806	+	562	87	20.5	-20.3	NP_945032		5' arm      3' arm
24966	-	50187	89	20	-20.3	NP_945104		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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