miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24907	-	5967	89	21.5	-20.2	NP_945037		5' arm      3' arm
24813	+	6030	86	20.5	-20.2	NP_945037		5' arm      3' arm
24814	+	6204	82	20.5	-27.1	NP_945038		5' arm      3' arm
24815	+	6660	90	20.5	-26.4	NP_945039		5' arm      3' arm
24816	+	6799	89	20.5	-31.9	NP_945039		5' arm      3' arm
24908	-	7096	89	21.5	-20.2	NP_945040		5' arm      3' arm
24818	+	7046	87	23.5	-24.9	NP_945040		5' arm      3' arm
24817	+	6917	90	20	-27.9	NP_945040		5' arm      3' arm
24819	+	7978	89	22	-20.8	NP_945042		5' arm      3' arm
24909	-	8217	90	22	-24	NP_945042		5' arm      3' arm
24820	+	8232	90	23	-35.6	NP_945043		5' arm      3' arm
24910	-	8406	85	19	-25.7	NP_945043		5' arm      3' arm
24917	-	11290	88	19.5	-20.3	NP_945044		5' arm      3' arm
24829	+	12072	90	22	-22.2	NP_945044		5' arm      3' arm
24823	+	10027	86	20.5	-31.7	NP_945044		5' arm      3' arm
24916	-	10980	90	21	-20.8	NP_945044		5' arm      3' arm
24825	+	10252	90	21	-25.7	NP_945044		5' arm      3' arm
24822	+	9645	89	19	-25.6	NP_945044		5' arm      3' arm
24828	+	11947	90	19	-21.3	NP_945044		5' arm      3' arm
24831	+	12437	89	21	-20.2	NP_945044		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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