miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24893	+	47998	89	22.5	-21.8	NP_945100		5' arm      3' arm
24892	+	47554	90	22	-21.7	NP_945099		5' arm      3' arm
24961	-	47262	89	23	-29.4	NP_945099		5' arm      3' arm
24891	+	47324	84	19.5	-21.7	NP_945099		5' arm      3' arm
24888	+	45834	90	22	-21.5	NP_945098		5' arm      3' arm
24960	-	46946	84	22.5	-29.6	NP_945098		5' arm      3' arm
24958	-	46559	90	20.5	-25.2	NP_945098		5' arm      3' arm
24959	-	46709	89	21.5	-23.3	NP_945098		5' arm      3' arm
24890	+	46621	89	22.5	-24.5	NP_945098		5' arm      3' arm
24889	+	46302	90	21	-23.1	NP_945098		5' arm      3' arm
24957	-	45676	89	19	-26.7	NP_945097		5' arm      3' arm
24887	+	45433	89	21.5	-25.5	NP_945097		5' arm      3' arm
24886	+	45122	89	21.5	-20.9	NP_945096		5' arm      3' arm
24885	+	44161	88	21.5	-25.3	NP_945094		5' arm      3' arm
24884	+	43275	81	19	-29.7	NP_945092		5' arm      3' arm
24956	-	42897	88	19	-20.7	NP_945090		5' arm      3' arm
24882	+	41170	81	23.5	-25	NP_945089		5' arm      3' arm
24881	+	40897	88	21.5	-24.8	NP_945089		5' arm      3' arm
24883	+	41356	87	20.5	-23	NP_945089		5' arm      3' arm
24955	-	41096	90	19	-22.7	NP_945089		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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