miRNA display CGI


Results 1 - 20 of 167 are showing below:
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GenBank Identifier RefSeq Acc. Name
38707890 NC_005284.1 Bacteriophage phi1026b

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
24902 + 54589 89 19 -21.9 NP_945113 5' arm      3' arm
24971 - 54551 87 19 -20.2 NP_945113 5' arm      3' arm
24972 - 54651 88 19 -23 NP_945113 5' arm      3' arm
24901 + 53837 90 21 -21.7 NP_945111 5' arm      3' arm
24900 + 53734 90 21.5 -26.1 NP_945111 5' arm      3' arm
24970 - 54079 89 21.5 -31.5 NP_945111 5' arm      3' arm
24969 - 53037 85 19 -22.2 NP_945109 5' arm      3' arm
24968 - 51786 90 20 -27.51 NP_945108 5' arm      3' arm
24899 + 51343 87 22 -26.4 NP_945108 5' arm      3' arm
24898 + 51103 89 20 -21.5 NP_945107 5' arm      3' arm
24897 + 50924 88 21 -23.3 NP_945106 5' arm      3' arm
24967 - 50312 90 21.5 -23.9 NP_945105 5' arm      3' arm
24966 - 50187 89 20 -20.3 NP_945104 5' arm      3' arm
24896 + 50154 88 22 -25.7 NP_945104 5' arm      3' arm
24965 - 49498 90 24.5 -26.4 NP_945103 5' arm      3' arm
24964 - 49151 90 20.5 -21.7 NP_945102 5' arm      3' arm
24962 - 48507 87 21 -22.2 NP_945102 5' arm      3' arm
24895 + 48827 90 21.5 -24.9 NP_945102 5' arm      3' arm
24963 - 48876 87 20 -23.1 NP_945102 5' arm      3' arm
24894 + 48246 86 21 -23.7 NP_945101 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.