miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30577	+	1749	86	19	-23.16	YP_164097		5' arm      3' arm
30578	+	3756	89	23	-20.7	YP_164099		5' arm      3' arm
30579	+	3966	89	21	-21.2	YP_164099		5' arm      3' arm
30580	+	7332	89	20.5	-30.2	YP_164103		5' arm      3' arm
30581	+	9610	88	23	-23.82	YP_164107		5' arm      3' arm
30582	+	10249	88	20.5	-25.5	YP_164107		5' arm      3' arm
30583	+	12656	89	19.5	-23.3	YP_164109		5' arm      3' arm
30584	+	19919	89	22.5	-22.7	YP_164120		5' arm      3' arm
30585	+	29299	90	23.5	-20.92	YP_164128		5' arm      3' arm
30586	+	32975	85	21	-19.7	YP_164132		5' arm      3' arm
30587	+	33873	90	19.5	-25.3	YP_164133		5' arm      3' arm
30588	+	36387	88	19	-31.4	YP_164135		5' arm      3' arm
30589	+	37597	88	22	-20.1	YP_164136		5' arm      3' arm
30590	+	41113	90	20	-28.7	YP_164141		5' arm      3' arm
30591	+	41973	80	20	-26.3	YP_164142		5' arm      3' arm
30592	+	45396	89	19.5	-19.8	YP_164146		5' arm      3' arm
30593	+	45854	89	20	-21	YP_164147		5' arm      3' arm
30594	+	50449	88	19	-26.4	YP_164151		5' arm      3' arm
30595	+	51790	90	19	-22.6	YP_164152		5' arm      3' arm
30596	+	52783	90	19.5	-22.8	YP_164153		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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