miRNA display CGI


Results 1 - 20 of 94 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692637 NC_006549.1 Singapore grouper iridovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30577 + 1749 86 19 -23.16 YP_164097 5' arm      3' arm
30578 + 3756 89 23 -20.7 YP_164099 5' arm      3' arm
30579 + 3966 89 21 -21.2 YP_164099 5' arm      3' arm
30580 + 7332 89 20.5 -30.2 YP_164103 5' arm      3' arm
30581 + 9610 88 23 -23.82 YP_164107 5' arm      3' arm
30582 + 10249 88 20.5 -25.5 YP_164107 5' arm      3' arm
30583 + 12656 89 19.5 -23.3 YP_164109 5' arm      3' arm
30584 + 19919 89 22.5 -22.7 YP_164120 5' arm      3' arm
30585 + 29299 90 23.5 -20.92 YP_164128 5' arm      3' arm
30586 + 32975 85 21 -19.7 YP_164132 5' arm      3' arm
30587 + 33873 90 19.5 -25.3 YP_164133 5' arm      3' arm
30588 + 36387 88 19 -31.4 YP_164135 5' arm      3' arm
30589 + 37597 88 22 -20.1 YP_164136 5' arm      3' arm
30590 + 41113 90 20 -28.7 YP_164141 5' arm      3' arm
30591 + 41973 80 20 -26.3 YP_164142 5' arm      3' arm
30592 + 45396 89 19.5 -19.8 YP_164146 5' arm      3' arm
30593 + 45854 89 20 -21 YP_164147 5' arm      3' arm
30594 + 50449 88 19 -26.4 YP_164151 5' arm      3' arm
30595 + 51790 90 19 -22.6 YP_164152 5' arm      3' arm
30596 + 52783 90 19.5 -22.8 YP_164153 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.