miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30617	+	108399	84	19	-23.5			5' arm      3' arm
30618	+	115257	90	23.5	-36			5' arm      3' arm
30619	+	116914	85	19.5	-21.6	YP_164227		5' arm      3' arm
30620	+	117311	89	22.5	-34.4	YP_164228		5' arm      3' arm
30621	+	130215	87	20	-24.8	YP_164245		5' arm      3' arm
30622	+	131623	90	22	-26.5	YP_164247		5' arm      3' arm
30623	+	131833	87	24.5	-22.9	YP_164247		5' arm      3' arm
30624	+	132995	89	21	-24.7	YP_164249		5' arm      3' arm
30625	+	139432	90	21	-24.1	YP_164257		5' arm      3' arm
30626	+	139659	87	19	-23.4	YP_164257		5' arm      3' arm
30627	-	549	86	21	-22.5			3' arm
30628	-	5176	88	23.5	-20.4	YP_164100		5' arm      3' arm
30629	-	5484	84	21	-22.6	YP_164100		5' arm      3' arm
30630	-	6645	90	19	-36.2	YP_164102		5' arm      3' arm
30631	-	6869	88	20.5	-28.3	YP_164102		5' arm      3' arm
30632	-	7805	89	20	-31.2	YP_164103		5' arm      3' arm
30633	-	21689	84	19.5	-19.8	YP_164121		5' arm      3' arm
30634	-	29387	87	25.5	-22.92	YP_164128		5' arm      3' arm
30635	-	33963	90	20	-29	YP_164133		5' arm      3' arm
30636	-	39727	90	25	-19.4	YP_164138		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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