miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30598	+	56189	88	21.5	-23.7	YP_164155		5' arm      3' arm
30599	+	56901	89	22	-25.3	YP_164155		5' arm      3' arm
30595	+	51790	90	19	-22.6	YP_164152		5' arm      3' arm
30594	+	50449	88	19	-26.4	YP_164151		5' arm      3' arm
30596	+	52783	90	19.5	-22.8	YP_164153		5' arm      3' arm
30597	+	54023	89	24	-28.4	YP_164152		5' arm      3' arm
30593	+	45854	89	20	-21	YP_164147		5' arm      3' arm
30592	+	45396	89	19.5	-19.8	YP_164146		5' arm      3' arm
30591	+	41973	80	20	-26.3	YP_164142		5' arm      3' arm
30590	+	41113	90	20	-28.7	YP_164141		5' arm      3' arm
30664	-	120080	88	23	-21.7	YP_164232		5' arm      3' arm
30663	-	119620	90	23	-19.8	YP_164232		5' arm      3' arm
30662	-	119176	88	22.5	-22.6	YP_164231		5' arm      3' arm
30661	-	115346	90	21	-37.5			5' arm      3' arm
30667	-	123863	90	20.5	-23.5			5' arm      3' arm
30668	-	124000	90	22.5	-25.8	YP_164236		5' arm      3' arm
30665	-	122118	89	23.5	-22.9	YP_164235		5' arm      3' arm
30666	-	122471	90	24	-32.7			5' arm      3' arm
30669	-	130130	88	21.5	-23	YP_164245		5' arm      3' arm
30627	-	549	86	21	-22.5			3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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