miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30630	-	6645	90	19	-36.2	YP_164102		5' arm      3' arm
30629	-	5484	84	21	-22.6	YP_164100		5' arm      3' arm
30628	-	5176	88	23.5	-20.4	YP_164100		5' arm      3' arm
30627	-	549	86	21	-22.5			3' arm
30626	+	139659	87	19	-23.4	YP_164257		5' arm      3' arm
30625	+	139432	90	21	-24.1	YP_164257		5' arm      3' arm
30624	+	132995	89	21	-24.7	YP_164249		5' arm      3' arm
30623	+	131833	87	24.5	-22.9	YP_164247		5' arm      3' arm
30622	+	131623	90	22	-26.5	YP_164247		5' arm      3' arm
30621	+	130215	87	20	-24.8	YP_164245		5' arm      3' arm
30620	+	117311	89	22.5	-34.4	YP_164228		5' arm      3' arm
30619	+	116914	85	19.5	-21.6	YP_164227		5' arm      3' arm
30618	+	115257	90	23.5	-36			5' arm      3' arm
30617	+	108399	84	19	-23.5			5' arm      3' arm
30616	+	107914	87	22.5	-23	YP_164218		5' arm      3' arm
30615	+	106290	90	21	-22.4	YP_164215		5' arm      3' arm
30614	+	105190	90	22	-20.8	YP_164213		5' arm      3' arm
30613	+	101840	86	20	-35	YP_164207		5' arm      3' arm
30612	+	97245	88	21.5	-23	YP_164199		5' arm      3' arm
30611	+	91442	87	19	-26.3	YP_164191		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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