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GenBank Identifier | RefSeq Acc. | Name |
45429963 | NC_005808.1 | Bordetella phage BMP-1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
26773 | - | 31750 | 90 | 22 | -21.9 | NP_996595 | 5' arm 3' arm | ||
26772 | - | 31158 | 85 | 20 | -20.4 | NP_996594 | 5' arm 3' arm | ||
26771 | - | 30337 | 88 | 22 | -22.5 | NP_996592 | 5' arm 3' arm | ||
26770 | - | 29944 | 90 | 19.5 | -22.4 | 5' arm 3' arm | |||
26769 | - | 29578 | 90 | 22.5 | -19.5 | NP_996591 | 5' arm 3' arm | ||
26768 | - | 29467 | 90 | 21 | -24.3 | NP_996591 | 5' arm 3' arm | ||
26767 | - | 29010 | 86 | 21 | -19.4 | NP_996591 | 5' arm 3' arm | ||
26766 | - | 28358 | 87 | 21.5 | -26.2 | NP_996591 | 5' arm 3' arm | ||
26765 | - | 28025 | 86 | 20 | -25.4 | NP_996591 | 5' arm 3' arm | ||
26764 | - | 27357 | 86 | 20.5 | -21.5 | NP_996591 | 5' arm 3' arm | ||
26763 | - | 27007 | 86 | 22 | -20.8 | NP_996590 | 5' arm 3' arm | ||
26762 | - | 26490 | 86 | 19 | -19.9 | NP_996589 | 5' arm 3' arm | ||
26761 | - | 25101 | 89 | 23.5 | -24.5 | NP_996587 | 5' arm 3' arm | ||
26760 | - | 24556 | 89 | 22.5 | -21.7 | NP_996587 | 5' arm 3' arm | ||
26759 | - | 24151 | 87 | 22 | -32.7 | 5' arm 3' arm | |||
26758 | - | 23953 | 90 | 22.5 | -25.6 | NP_996586 | 5' arm 3' arm | ||
26757 | - | 23571 | 87 | 20.5 | -22.7 | NP_996585 | 5' arm 3' arm | ||
26756 | - | 22048 | 88 | 20.5 | -22.4 | NP_996583 | 5' arm 3' arm | ||
26755 | - | 21439 | 89 | 21.5 | -25.1 | NP_996583 | 5' arm 3' arm | ||
26754 | - | 20061 | 90 | 20.5 | -22.2 | NP_996580 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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