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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28076 | + | 33185 | 89 | 21 | -22 | 5' arm 3' arm | |||
| 28030 | + | 17778 | 89 | 24.5 | -22 | YP_024937 | 5' arm 3' arm | ||
| 28121 | - | 7884 | 90 | 19.5 | -22 | YP_024930 | 5' arm 3' arm | ||
| 28034 | + | 19203 | 86 | 21.5 | -22.1 | YP_024938 | 5' arm 3' arm | ||
| 28000 | + | 1937 | 88 | 19 | -22.1 | YP_024923 | 5' arm 3' arm | ||
| 28013 | + | 9090 | 89 | 20 | -22.3 | YP_024932 | 5' arm 3' arm | ||
| 28141 | - | 17409 | 89 | 20.5 | -22.4 | YP_024937 | 5' arm 3' arm | ||
| 28124 | - | 9560 | 90 | 21.5 | -22.5 | YP_024932 | 5' arm 3' arm | ||
| 28057 | + | 28571 | 89 | 19.5 | -22.5 | YP_024950 | 5' arm 3' arm | ||
| 28058 | + | 28733 | 85 | 19.5 | -22.6 | YP_024951 | 5' arm 3' arm | ||
| 28114 | - | 5331 | 90 | 21.5 | -22.6 | YP_024926 | 5' arm 3' arm | ||
| 28155 | - | 24653 | 90 | 21 | -22.7 | YP_024945 | 5' arm 3' arm | ||
| 28127 | - | 11771 | 85 | 21 | -22.7 | YP_024934 | 5' arm 3' arm | ||
| 28162 | - | 28251 | 88 | 20.5 | -22.7 | YP_024950 | 5' arm 3' arm | ||
| 28075 | + | 32639 | 84 | 20 | -22.8 | YP_024954 | 5' arm 3' arm | ||
| 28023 | + | 14235 | 90 | 21.5 | -22.8 | YP_024936 | 5' arm 3' arm | ||
| 28094 | + | 39155 | 89 | 19.5 | -22.8 | YP_024964 | 5' arm 3' arm | ||
| 28001 | + | 2070 | 88 | 21.5 | -22.9 | YP_024923 | 5' arm 3' arm | ||
| 28165 | - | 29345 | 87 | 23.5 | -23.2 | 5' arm 3' arm | |||
| 28074 | + | 32453 | 90 | 21.5 | -23.3 | YP_024953 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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