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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28031 | + | 17959 | 90 | 19.5 | -21 | YP_024937 | 5' arm 3' arm | ||
| 28164 | - | 29010 | 85 | 19 | -21.1 | YP_024951 | 5' arm 3' arm | ||
| 28143 | - | 18127 | 90 | 19.5 | -21.1 | YP_024937 | 5' arm 3' arm | ||
| 28101 | + | 42062 | 88 | 21 | -21.3 | YP_024966 | 5' arm 3' arm | ||
| 28083 | + | 35431 | 88 | 22 | -21.3 | YP_024959 | 5' arm 3' arm | ||
| 28043 | + | 22714 | 89 | 21 | -21.4 | YP_024942 | 5' arm 3' arm | ||
| 28103 | + | 42298 | 90 | 20.5 | -21.4 | YP_024966 | 5' arm 3' arm | ||
| 28144 | - | 18485 | 87 | 20 | -21.4 | YP_024937 | 5' arm 3' arm | ||
| 28142 | - | 17505 | 87 | 19.5 | -21.6 | YP_024937 | 5' arm 3' arm | ||
| 28128 | - | 12473 | 90 | 23 | -21.6 | YP_024935 | 5' arm 3' arm | ||
| 28176 | - | 38096 | 85 | 19.5 | -21.7 | 5' arm 3' arm | |||
| 28082 | + | 35260 | 88 | 23.5 | -21.7 | YP_024959 | 5' arm 3' arm | ||
| 28097 | + | 40288 | 89 | 20.5 | -21.8 | YP_024966 | 5' arm 3' arm | ||
| 28038 | + | 21964 | 86 | 19 | -21.8 | YP_024939 | 5' arm 3' arm | ||
| 28046 | + | 24625 | 90 | 21.5 | -21.8 | YP_024945 | 5' arm 3' arm | ||
| 27997 | + | 1390 | 86 | 19.5 | -21.9 | YP_024923 | 5' arm 3' arm | ||
| 28071 | + | 31569 | 90 | 19.5 | -21.9 | YP_024953 | 5' arm 3' arm | ||
| 28027 | + | 16288 | 89 | 21.5 | -21.9 | YP_024936 | 5' arm 3' arm | ||
| 28159 | - | 26977 | 85 | 22 | -21.9 | YP_024948 | 5' arm 3' arm | ||
| 28120 | - | 7564 | 86 | 20.5 | -21.9 | YP_024929 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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