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| GenBank Identifier | RefSeq Acc. | Name |
| 72257064 | NC_005886.2 | Burkholderia cenocepacia phage BcepB1A |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27969 | - | 15362 | 87 | 27.5 | -26.6 | YP_024869 | 5' arm 3' arm | ||
| 27922 | + | 7565 | 88 | 25 | -19.7 | YP_024917 | 5' arm 3' arm | ||
| 27958 | - | 5364 | 87 | 24.5 | -23.6 | YP_024914 | 5' arm 3' arm | ||
| 27981 | - | 30044 | 90 | 24 | -19.5 | YP_024888 | 5' arm 3' arm | ||
| 27951 | + | 43519 | 86 | 24 | -22.9 | YP_024902 | 5' arm 3' arm | ||
| 27950 | + | 42732 | 84 | 24 | -29.6 | YP_024901 | 5' arm 3' arm | ||
| 27928 | + | 16218 | 90 | 23.5 | -21.7 | YP_024871 | 5' arm 3' arm | ||
| 27962 | - | 11705 | 87 | 23.5 | -35.4 | YP_024863 | 5' arm 3' arm | ||
| 27927 | + | 15040 | 90 | 23 | -26 | YP_024868 | 5' arm 3' arm | ||
| 27925 | + | 13606 | 90 | 23 | -23.6 | YP_024865 | 5' arm 3' arm | ||
| 27986 | - | 35571 | 89 | 22.5 | -21.3 | YP_024893 | 5' arm 3' arm | ||
| 27961 | - | 7540 | 89 | 22.5 | -24.9 | YP_024917 | 5' arm 3' arm | ||
| 27936 | + | 22526 | 81 | 22.5 | -23.02 | YP_291177 | 5' arm 3' arm | ||
| 27954 | + | 44069 | 87 | 22.5 | -21.6 | YP_024902 | 5' arm 3' arm | ||
| 27941 | + | 29535 | 90 | 22.5 | -20.1 | YP_024888 | 5' arm 3' arm | ||
| 27959 | - | 6086 | 87 | 22.5 | -20.7 | YP_024914 | 5' arm 3' arm | ||
| 27930 | + | 17623 | 90 | 22.5 | -23.8 | YP_024872 | 5' arm 3' arm | ||
| 27965 | - | 13407 | 88 | 22.5 | -26.4 | YP_024865 | 5' arm 3' arm | ||
| 27933 | + | 20904 | 87 | 22 | -27.9 | YP_024875 | 5' arm 3' arm | ||
| 27944 | + | 33975 | 84 | 22 | -29.6 | YP_291186 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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