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| GenBank Identifier | RefSeq Acc. | Name |
| 72257064 | NC_005886.2 | Burkholderia cenocepacia phage BcepB1A |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 27923 | + | 11739 | 89 | 21.5 | -25.2 | YP_024864 | 5' arm 3' arm | ||
| 27924 | + | 13114 | 89 | 22 | -26.1 | YP_024865 | 5' arm 3' arm | ||
| 27925 | + | 13606 | 90 | 23 | -23.6 | YP_024865 | 5' arm 3' arm | ||
| 27921 | + | 6031 | 89 | 19.5 | -24.1 | YP_024914 | 5' arm 3' arm | ||
| 27922 | + | 7565 | 88 | 25 | -19.7 | YP_024917 | 5' arm 3' arm | ||
| 27932 | + | 20406 | 89 | 21.5 | -26.4 | YP_024874 | 5' arm 3' arm | ||
| 27935 | + | 22035 | 89 | 21 | -23.2 | YP_024875 | 5' arm 3' arm | ||
| 27951 | + | 43519 | 86 | 24 | -22.9 | YP_024902 | 5' arm 3' arm | ||
| 27950 | + | 42732 | 84 | 24 | -29.6 | YP_024901 | 5' arm 3' arm | ||
| 27946 | + | 38600 | 90 | 21.5 | -23.32 | YP_024897 | 5' arm 3' arm | ||
| 27945 | + | 35483 | 89 | 19 | -23 | YP_024893 | 5' arm 3' arm | ||
| 27943 | + | 33715 | 90 | 19 | -24 | 5' arm 3' arm | |||
| 27944 | + | 33975 | 84 | 22 | -29.6 | YP_291186 | 5' arm 3' arm | ||
| 27940 | + | 27711 | 87 | 19 | -25.1 | 5' arm 3' arm | |||
| 27942 | + | 29703 | 90 | 20.5 | -19.5 | YP_024888 | 5' arm 3' arm | ||
| 27941 | + | 29535 | 90 | 22.5 | -20.1 | YP_024888 | 5' arm 3' arm | ||
| 27937 | + | 24138 | 90 | 19.5 | -19.4 | YP_024878 | 5' arm 3' arm | ||
| 27939 | + | 27209 | 87 | 20 | -22.8 | YP_024883 | 5' arm 3' arm | ||
| 27938 | + | 25682 | 90 | 20 | -23.3 | YP_024895 | 5' arm 3' arm | ||
| 27934 | + | 21220 | 90 | 20.5 | -23.2 | YP_024875 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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