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| GenBank Identifier | RefSeq Acc. | Name |
| 72257064 | NC_005886.2 | Burkholderia cenocepacia phage BcepB1A |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27970 | - | 16788 | 90 | 21 | -23.7 | YP_024871 | 5' arm 3' arm | ||
| 27982 | - | 32552 | 79 | 21 | -25.4 | YP_024889 | 5' arm 3' arm | ||
| 27968 | - | 14977 | 90 | 21 | -21.1 | YP_024868 | 5' arm 3' arm | ||
| 27983 | - | 32661 | 89 | 21.5 | -19.8 | YP_024889 | 5' arm 3' arm | ||
| 27946 | + | 38600 | 90 | 21.5 | -23.32 | YP_024897 | 5' arm 3' arm | ||
| 27994 | - | 44188 | 87 | 21.5 | -28.3 | YP_024902 | 5' arm 3' arm | ||
| 27974 | - | 20494 | 89 | 21.5 | -20.4 | YP_024874 | 5' arm 3' arm | ||
| 27992 | - | 41600 | 88 | 21.5 | -30 | YP_024900 | 5' arm 3' arm | ||
| 27957 | - | 3688 | 88 | 21.5 | -27.3 | YP_024912 | 5' arm 3' arm | ||
| 27923 | + | 11739 | 89 | 21.5 | -25.2 | YP_024864 | 5' arm 3' arm | ||
| 27932 | + | 20406 | 89 | 21.5 | -26.4 | YP_024874 | 5' arm 3' arm | ||
| 27931 | + | 18201 | 90 | 22 | -19.5 | YP_024873 | 5' arm 3' arm | ||
| 27926 | + | 14893 | 85 | 22 | -21.3 | YP_024868 | 5' arm 3' arm | ||
| 27944 | + | 33975 | 84 | 22 | -29.6 | YP_291186 | 5' arm 3' arm | ||
| 27960 | - | 7118 | 89 | 22 | -22 | YP_024916 | 5' arm 3' arm | ||
| 27966 | - | 13571 | 85 | 22 | -20.6 | YP_024865 | 5' arm 3' arm | ||
| 27924 | + | 13114 | 89 | 22 | -26.1 | YP_024865 | 5' arm 3' arm | ||
| 27933 | + | 20904 | 87 | 22 | -27.9 | YP_024875 | 5' arm 3' arm | ||
| 27936 | + | 22526 | 81 | 22.5 | -23.02 | YP_291177 | 5' arm 3' arm | ||
| 27954 | + | 44069 | 87 | 22.5 | -21.6 | YP_024902 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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