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| GenBank Identifier | RefSeq Acc. | Name |
| 72257064 | NC_005886.2 | Burkholderia cenocepacia phage BcepB1A |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27929 | + | 16699 | 90 | 20 | -25.9 | YP_024871 | 5' arm 3' arm | ||
| 27988 | - | 36521 | 89 | 20 | -21.1 | YP_024894 | 5' arm 3' arm | ||
| 27978 | - | 25028 | 89 | 20 | -23.4 | 5' arm 3' arm | |||
| 27976 | - | 23031 | 89 | 20 | -25.4 | YP_024877 | 5' arm 3' arm | ||
| 27938 | + | 25682 | 90 | 20 | -23.3 | YP_024895 | 5' arm 3' arm | ||
| 27939 | + | 27209 | 87 | 20 | -22.8 | YP_024883 | 5' arm 3' arm | ||
| 27984 | - | 32790 | 90 | 20 | -24.1 | YP_024889 | 5' arm 3' arm | ||
| 27990 | - | 40612 | 90 | 20.5 | -21 | YP_291195 | 5' arm 3' arm | ||
| 27953 | + | 43942 | 87 | 20.5 | -28.4 | YP_024902 | 5' arm 3' arm | ||
| 27947 | + | 41268 | 82 | 20.5 | -21.7 | YP_024900 | 5' arm 3' arm | ||
| 27991 | - | 41331 | 89 | 20.5 | -26.7 | YP_024900 | 5' arm 3' arm | ||
| 27980 | - | 26635 | 87 | 20.5 | -20.1 | YP_291180 | 5' arm 3' arm | ||
| 27934 | + | 21220 | 90 | 20.5 | -23.2 | YP_024875 | 5' arm 3' arm | ||
| 27964 | - | 12908 | 81 | 20.5 | -20.7 | YP_024865 | 5' arm 3' arm | ||
| 27942 | + | 29703 | 90 | 20.5 | -19.5 | YP_024888 | 5' arm 3' arm | ||
| 27975 | - | 20981 | 90 | 20.5 | -23.8 | YP_024875 | 5' arm 3' arm | ||
| 27985 | - | 34588 | 89 | 20.5 | -26.4 | 5' arm 3' arm | |||
| 27982 | - | 32552 | 79 | 21 | -25.4 | YP_024889 | 5' arm 3' arm | ||
| 27968 | - | 14977 | 90 | 21 | -21.1 | YP_024868 | 5' arm 3' arm | ||
| 27977 | - | 24469 | 87 | 21 | -21.4 | YP_024878 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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