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| GenBank Identifier | RefSeq Acc. | Name |
| 72257064 | NC_005886.2 | Burkholderia cenocepacia phage BcepB1A |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27923 | + | 11739 | 89 | 21.5 | -25.2 | YP_024864 | 5' arm 3' arm | ||
| 27940 | + | 27711 | 87 | 19 | -25.1 | 5' arm 3' arm | |||
| 27967 | - | 14643 | 90 | 19.5 | -25 | YP_024867 | 5' arm 3' arm | ||
| 27961 | - | 7540 | 89 | 22.5 | -24.9 | YP_024917 | 5' arm 3' arm | ||
| 27987 | - | 35997 | 89 | 19 | -24.7 | YP_024893 | 5' arm 3' arm | ||
| 27995 | - | 46916 | 90 | 19.5 | -24.7 | YP_024920 | 5' arm 3' arm | ||
| 27971 | - | 17010 | 89 | 19 | -24.6 | YP_024871 | 5' arm 3' arm | ||
| 27921 | + | 6031 | 89 | 19.5 | -24.1 | YP_024914 | 5' arm 3' arm | ||
| 27984 | - | 32790 | 90 | 20 | -24.1 | YP_024889 | 5' arm 3' arm | ||
| 27972 | - | 17102 | 88 | 19.5 | -24 | YP_024871 | 5' arm 3' arm | ||
| 27973 | - | 17745 | 89 | 19.5 | -24 | YP_024872 | 5' arm 3' arm | ||
| 27943 | + | 33715 | 90 | 19 | -24 | 5' arm 3' arm | |||
| 27948 | + | 41504 | 77 | 19 | -23.8 | YP_024900 | 5' arm 3' arm | ||
| 27975 | - | 20981 | 90 | 20.5 | -23.8 | YP_024875 | 5' arm 3' arm | ||
| 27930 | + | 17623 | 90 | 22.5 | -23.8 | YP_024872 | 5' arm 3' arm | ||
| 27970 | - | 16788 | 90 | 21 | -23.7 | YP_024871 | 5' arm 3' arm | ||
| 27958 | - | 5364 | 87 | 24.5 | -23.6 | YP_024914 | 5' arm 3' arm | ||
| 27925 | + | 13606 | 90 | 23 | -23.6 | YP_024865 | 5' arm 3' arm | ||
| 27956 | - | 1537 | 89 | 19 | -23.4 | YP_024910 | 5' arm 3' arm | ||
| 27978 | - | 25028 | 89 | 20 | -23.4 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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