miRNA display CGI


Results 21 - 40 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30799 + 54406 90 19 -21.5 YP_164324 5' arm      3' arm
30860 - 30195 90 19 -21.2 YP_164307 5' arm      3' arm
30729 + 15492 88 19 -26.1 YP_164286 5' arm      3' arm
30685 + 1067 87 19 -20.1 YP_164266 5' arm      3' arm
30692 + 2813 90 19 -20.6 YP_164269 5' arm      3' arm
30719 + 11279 83 19 -22 YP_164279 5' arm      3' arm
30928 - 57814 90 19.5 -26 YP_164324       3' arm
30757 + 31530 87 19.5 -23.8 YP_164308 5' arm      3' arm
30737 + 19369 89 19.5 -22.5 5' arm      3' arm
30809 + 61635 90 19.5 -23.3 5' arm      3' arm
30751 + 27613 78 19.5 -21 5' arm      3' arm
30753 + 29781 89 19.5 -22.6 YP_164306 5' arm      3' arm
30736 + 19213 85 19.5 -20.4 5' arm      3' arm
30740 + 19982 90 19.5 -22.1 YP_164296 5' arm      3' arm
30921 - 53852 86 19.5 -20.7 YP_164323 5' arm      3' arm
30901 - 47175 88 19.5 -22.2 YP_164322       3' arm
30904 - 49191 89 19.5 -24.4 YP_164323 5' arm      3' arm
30930 - 59312 90 19.5 -29.1 5' arm      3' arm
30926 - 55275 81 19.5 -24.8 YP_164324 5' arm      3' arm
30717 + 10796 89 19.5 -24.9 YP_164278 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.