miRNA display CGI


Results 1 - 20 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30706 + 6898 88 19 -32.3 YP_164274 5' arm      3' arm
30759 + 32622 87 19 -24.41 YP_164309 5' arm      3' arm
30758 + 32290 90 19 -28.2 YP_164309 5' arm      3' arm
30685 + 1067 87 19 -20.1 YP_164266 5' arm      3' arm
30692 + 2813 90 19 -20.6 YP_164269 5' arm      3' arm
30696 + 4383 75 19 -20 YP_164271 5' arm      3' arm
30719 + 11279 83 19 -22 YP_164279 5' arm      3' arm
30805 + 59220 88 19 -28.1 5' arm      3' arm
30879 - 37317 90 19 -23.6 YP_164315 5' arm      3' arm
30940 - 63310 87 19 -24 YP_164333 5' arm      3' arm
30792 + 49988 89 19 -26.1 YP_164323 5' arm      3' arm
30907 - 49559 89 19 -26 YP_164323 5' arm      3' arm
30876 - 36012 88 19 -24.3 YP_164315 5' arm      3' arm
30729 + 15492 88 19 -26.1 YP_164286 5' arm      3' arm
30767 + 37297 89 19 -27.4 YP_164315 5' arm      3' arm
30715 + 9386 90 19 -26.8 YP_164277 5' arm      3' arm
30804 + 58674 89 19 -23.8 YP_164324 5' arm      3' arm
30814 + 64814 90 19 -21.9 YP_164334 5' arm      3' arm
30799 + 54406 90 19 -21.5 YP_164324 5' arm      3' arm
30713 + 8725 90 19 -24.4 YP_164276 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.