miRNA display CGI


Results 1 - 20 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30843 - 22866 85 25.5 -26.1 5' arm      3' arm
30807 + 60027 90 20 -24.8 5' arm      3' arm
30805 + 59220 88 19 -28.1 5' arm      3' arm
30930 - 59312 90 19.5 -29.1 5' arm      3' arm
30751 + 27613 78 19.5 -21 5' arm      3' arm
30722 + 12758 89 21.5 -25.6 5' arm      3' arm
30731 + 16570 88 20.5 -24.5 5' arm      3' arm
30734 + 17343 85 25 -28.9 5' arm      3' arm
30728 + 15051 90 23 -19.4 5' arm      3' arm
30809 + 61635 90 19.5 -23.3 5' arm      3' arm
30878 - 36813 88 22.5 -22.7 5' arm      3' arm
30736 + 19213 85 19.5 -20.4 5' arm      3' arm
30834 - 19436 90 21.5 -20.4 5' arm      3' arm
30782 + 42987 90 21.5 -25.4 5' arm      3' arm
30737 + 19369 89 19.5 -22.5 5' arm      3' arm
30798 + 54191 88 21 -28.8 5' arm      3' arm
30856 - 28806 89 19.5 -21.6 5' arm      3' arm
30688 + 1884 87 21 -22.2 5' arm      3' arm
30733 + 16814 90 23 -19.4 5' arm      3' arm
30683 + 337 89 21 -27 YP_164265 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.