miRNA display CGI


Results 1 - 20 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30752 + 29503 86 23.5 -35.5 YP_164306 5' arm      3' arm
30923 - 54403 88 24.5 -34.5 YP_164324 5' arm      3' arm
30781 + 42418 90 20.5 -33.7 YP_164318 5' arm      3' arm
30723 + 12878 89 25.5 -33.4 YP_164282 5' arm      3' arm
30716 + 10335 86 25 -33.3 YP_164278 5' arm      3' arm
30918 - 53229 87 23.5 -33 YP_164323 5' arm      3' arm
30706 + 6898 88 19 -32.3 YP_164274 5' arm      3' arm
30883 - 39110 87 20 -31.6 YP_164316 5' arm      3' arm
30835 - 19554 90 22.5 -31.2 YP_164295 5' arm      3' arm
30742 + 20516 87 20.5 -30.4 YP_164297 5' arm      3' arm
30793 + 50580 84 24 -30.3 YP_164323 5' arm      3' arm
30847 - 24572 90 23 -30.2 YP_164303 5' arm      3' arm
30791 + 48672 87 20 -30.2 YP_164323 5' arm      3' arm
30818 - 3664 88 20.5 -30 YP_164270 5' arm      3' arm
30695 + 3492 89 22.5 -29.9 YP_164270 5' arm      3' arm
30684 + 947 90 22.5 -29.9 YP_164266 5' arm      3' arm
30698 + 4682 90 23.5 -29.5 YP_164272 5' arm      3' arm
30882 - 38687 87 22 -29.3 YP_164316 5' arm      3' arm
30930 - 59312 90 19.5 -29.1 5' arm      3' arm
30933 - 60174 85 22.5 -29 YP_164327 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.