miRNA display CGI


Results 1 - 20 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30814 + 64814 90 19 -21.9 YP_164334 5' arm      3' arm
30813 + 63459 83 20 -21.3 YP_164333 5' arm      3' arm
30941 - 63512 90 20 -22.5 YP_164333 5' arm      3' arm
30940 - 63310 87 19 -24 YP_164333 5' arm      3' arm
30939 - 62533 90 21 -24 YP_164331 5' arm      3' arm
30811 + 62302 90 21 -20.8 YP_164331 5' arm      3' arm
30812 + 62562 90 20 -19.8 YP_164331 5' arm      3' arm
30938 - 62288 86 23 -25.1 YP_164331 5' arm      3' arm
30810 + 62009 87 23 -23.7 YP_164330 5' arm      3' arm
30937 - 62027 90 23 -21.1 YP_164330 5' arm      3' arm
30936 - 61278 86 19.5 -19.9 YP_164329 5' arm      3' arm
30808 + 60702 90 24 -23.6 YP_164328 5' arm      3' arm
30935 - 61103 85 22.5 -27 YP_164328 5' arm      3' arm
30933 - 60174 85 22.5 -29 YP_164327 5' arm      3' arm
30934 - 60381 89 20 -22.4 YP_164327 5' arm      3' arm
30932 - 59971 87 21 -22.7 YP_164326 5' arm      3' arm
30806 + 59351 89 21 -24.4 YP_164325 5' arm      3' arm
30931 - 59576 90 21 -22.4 YP_164325 5' arm      3' arm
30802 + 58171 89 20 -24.8 YP_164324 5' arm      3' arm
30800 + 55100 88 21 -25.2 YP_164324 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.