miRNA display CGI


Results 1 - 20 of 259 are showing below:
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GenBank Identifier RefSeq Acc. Name
56692908 NC_006552.1 Pseudomonas aeruginosa phage F116

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
30686 + 1166 90 27 -27.2 YP_164267 5' arm      3' arm
30875 - 35838 90 25.5 -27.2 YP_164315 5' arm      3' arm
30890 - 42640 90 25.5 -22 YP_164318 5' arm      3' arm
30723 + 12878 89 25.5 -33.4 YP_164282 5' arm      3' arm
30732 + 16704 90 25.5 -23.4 YP_164289 5' arm      3' arm
30843 - 22866 85 25.5 -26.1 5' arm      3' arm
30734 + 17343 85 25 -28.9 5' arm      3' arm
30716 + 10335 86 25 -33.3 YP_164278 5' arm      3' arm
30853 - 26640 88 24.5 -22.4 YP_164304 5' arm      3' arm
30923 - 54403 88 24.5 -34.5 YP_164324 5' arm      3' arm
30885 - 39946 89 24.5 -24 YP_164317 5' arm      3' arm
30772 + 39087 90 24 -22.5 YP_164316 5' arm      3' arm
30808 + 60702 90 24 -23.6 YP_164328 5' arm      3' arm
30922 - 54118 90 24 -20.8 YP_164323 5' arm      3' arm
30793 + 50580 84 24 -30.3 YP_164323 5' arm      3' arm
30768 + 37723 89 23.5 -23 YP_164315 5' arm      3' arm
30698 + 4682 90 23.5 -29.5 YP_164272 5' arm      3' arm
30918 - 53229 87 23.5 -33 YP_164323 5' arm      3' arm
30761 + 34247 86 23.5 -21.6 YP_164313 5' arm      3' arm
30891 - 42777 90 23.5 -19.54 YP_164319 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.