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GenBank Identifier | RefSeq Acc. | Name |
56160529 | AC_000008.1 | Human adenovirus type 5 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
215 | + | 351 | 90 | 22 | -25.5 | 5' arm 3' arm | |||
216 | + | 4526 | 90 | 25 | -29.9 | AP_000201 | 5' arm 3' arm | ||
217 | + | 4627 | 83 | 19.5 | -20.7 | AP_000201 | 5' arm 3' arm | ||
218 | + | 5302 | 88 | 25.5 | -25.9 | AP_000201 | 5' arm 3' arm | ||
219 | + | 5477 | 89 | 19.5 | -20.1 | AP_000202 | 5' arm 3' arm | ||
220 | + | 5997 | 88 | 23 | -25.5 | AP_000202 | 5' arm 3' arm | ||
221 | + | 6607 | 86 | 22.5 | -28.2 | AP_000202 | 5' arm 3' arm | ||
222 | + | 8344 | 90 | 20 | -28.2 | AP_000202 | 5' arm 3' arm | ||
223 | + | 8668 | 90 | 22.5 | -21.6 | AP_000203 | 5' arm 3' arm | ||
224 | + | 9487 | 90 | 20 | -25.1 | AP_000203 | 5' arm 3' arm | ||
225 | + | 9725 | 88 | 22 | -25 | AP_000203 | 5' arm 3' arm | ||
226 | + | 10079 | 75 | 21 | -25.3 | AP_000203 | 5' arm 3' arm | ||
227 | + | 10432 | 90 | 21 | -24 | AP_000203 | 5' arm 3' arm | ||
228 | + | 10793 | 90 | 23 | -22.6 | 5' arm 3' arm | |||
229 | + | 10883 | 89 | 21.5 | -21.9 | 5' arm 3' arm | |||
230 | + | 16317 | 88 | 23 | -23.9 | AP_000207 | 5' arm 3' arm | ||
231 | + | 17122 | 86 | 20 | -21.1 | AP_000208 | 5' arm 3' arm | ||
232 | + | 17300 | 85 | 20 | -20.8 | AP_000208 | 5' arm 3' arm | ||
233 | + | 20345 | 87 | 26 | -29.9 | AP_000211 | 5' arm 3' arm | ||
234 | + | 23232 | 79 | 19 | -25.8 | AP_000213 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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