miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8982	+	35392	90	19.5	-20.2	NP_064143		5' arm      3' arm
8983	+	37485	90	19	-19.7			5' arm      3' arm
8984	+	38432	87	19	-22.32	NP_064147		5' arm      3' arm
8985	+	39310	90	19.5	-22	NP_064148		5' arm      3' arm
8986	+	39426	89	21.5	-25.5	NP_064148		5' arm      3' arm
8987	+	39633	89	19	-24.6	NP_064148		5' arm      3' arm
8988	+	40073	89	20.5	-23.7	NP_064148		5' arm      3' arm
8989	+	40740	85	24.5	-28.4	NP_064149		5' arm      3' arm
8990	+	41049	85	19	-22	NP_064150		5' arm      3' arm
8991	+	41566	89	24.5	-28.1	NP_064150		5' arm      3' arm
8992	+	41672	89	19.5	-24.3			5' arm      3' arm
8993	+	41773	90	20	-21.9	NP_064150		5' arm      3' arm
8994	+	42187	89	21	-22.1	NP_064150		5' arm      3' arm
8995	+	43398	80	19.5	-22.2	NP_064151		5' arm      3' arm
8996	+	43572	88	22	-25.9	NP_064151		5' arm      3' arm
8997	+	43869	90	20	-27.9	NP_064151		5' arm      3' arm
8998	+	45208	90	20	-29.6	NP_064151		5' arm      3' arm
8999	+	45550	90	19	-31.5	NP_064151		5' arm      3' arm
9000	+	46037	88	20.5	-20.6	NP_064152		5' arm      3' arm
9001	+	46218	89	21	-25.3	NP_064152		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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