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GenBank Identifier | RefSeq Acc. | Name |
20198505 | NC_002512.2 | Murid herpesvirus 2 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8949 | + | 10727 | 87 | 19 | -26.6 | NP_064126 | 5' arm 3' arm | ||
9045 | + | 82570 | 89 | 19 | -26.9 | 5' arm 3' arm | |||
9158 | + | 154047 | 87 | 19 | -22.2 | NP_064213 | 5' arm 3' arm | ||
9382 | - | 197185 | 90 | 19 | -23.5 | NP_064251 | 5' arm 3' arm | ||
9069 | + | 92808 | 87 | 19 | -26.2 | NP_064174 | 5' arm 3' arm | ||
9278 | - | 73849 | 87 | 19 | -23.7 | NP_064163 | 5' arm 3' arm | ||
9019 | + | 62642 | 85 | 19 | -26.8 | NP_064160 | 5' arm 3' arm | ||
9016 | + | 59330 | 88 | 19 | -24.3 | NP_064158 | 5' arm 3' arm | ||
9337 | - | 129061 | 90 | 19 | -20.3 | NP_064196 | 5' arm 3' arm | ||
9096 | + | 108983 | 85 | 19 | -25.1 | NP_064183 | 5' arm 3' arm | ||
9117 | + | 121114 | 89 | 19 | -31.5 | NP_064189 | 5' arm 3' arm | ||
9121 | + | 123145 | 89 | 19 | -19.4 | NP_064192 | 5' arm 3' arm | ||
9119 | + | 122310 | 90 | 19 | -20.3 | NP_064191 | 5' arm 3' arm | ||
8958 | + | 18669 | 90 | 19 | -27.7 | NP_064132 | 5' arm 3' arm | ||
9009 | + | 55862 | 90 | 19 | -24 | NP_064154 | 5' arm 3' arm | ||
9344 | - | 133638 | 87 | 19 | -22.5 | NP_064202 | 5' arm 3' arm | ||
9374 | - | 191352 | 89 | 19 | -20.7 | NP_064247 | 5' arm 3' arm | ||
9143 | + | 142018 | 87 | 19 | -30.14 | 5' arm 3' arm | |||
9244 | - | 52428 | 89 | 19 | -28.4 | NP_064154 | 5' arm 3' arm | ||
9386 | - | 224274 | 90 | 19 | -20 | NP_064274 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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