miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9370	-	186103	90	19	-20.3	NP_064244		5' arm      3' arm
9388	-	226264	90	19	-21.8	NP_064275		5' arm      3' arm
9070	+	92922	90	19.5	-23.4	NP_064174		5' arm      3' arm
8944	+	3340	89	19.5	-24.2	NP_064116		5' arm      3' arm
8969	+	25891	88	19.5	-20.9	NP_064137		5' arm      3' arm
9353	-	142104	87	19.5	-26.4			5' arm      3' arm
9352	-	141764	82	19.5	-23.2	NP_064205		5' arm      3' arm
8985	+	39310	90	19.5	-22	NP_064148		5' arm      3' arm
9025	+	69983	88	19.5	-28.4	NP_064162		5' arm      3' arm
8992	+	41672	89	19.5	-24.3			5' arm      3' arm
8995	+	43398	80	19.5	-22.2	NP_064151		5' arm      3' arm
9361	-	156383	90	19.5	-26.9	NP_064216		5' arm
9367	-	179129	89	19.5	-21.2	NP_064238		5' arm      3' arm
9081	+	100279	85	19.5	-25.9	NP_064178		5' arm      3' arm
9035	+	78810	88	19.5	-26.8			5' arm      3' arm
9083	+	102599	89	19.5	-24.2	NP_064180		5' arm      3' arm
9004	+	49706	89	19.5	-21	NP_064154		5' arm      3' arm
9341	-	132344	90	19.5	-21.9	NP_064201		5' arm      3' arm
9051	+	84596	90	19.5	-29.6	NP_064166		5' arm      3' arm
9120	+	122760	87	19.5	-29.6	NP_064192		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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