miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1258	+	3540	85	19	-24.5	NP_052251		5' arm      3' arm
1260	+	8193	89	25.5	-21.5	NP_052259		5' arm      3' arm
1259	+	6258	85	19	-25.3	NP_052254		5' arm      3' arm
1261	+	10910	90	21	-19.5	NP_052265		5' arm      3' arm
1289	-	14772	89	20	-21.4			5' arm      3' arm
1285	-	7955	90	22.5	-24.2	NP_052258		5' arm      3' arm
1287	-	9607	89	20	-23.1	NP_052262		5' arm      3' arm
1286	-	8481	87	19	-24.3	NP_052259		5' arm      3' arm
1282	-	5659	88	24.5	-23.5	NP_052253		5' arm      3' arm
1280	-	4438	89	21.5	-21.8	NP_052252		5' arm      3' arm
1283	-	5955	90	20	-21.5	NP_052254		5' arm      3' arm
1291	-	16389	87	20	-25.6	NP_052272		5' arm      3' arm
1290	-	16240	88	22	-22.8	NP_052271		5' arm      3' arm
1288	-	14173	90	25	-20.7			5' arm      3' arm
1292	-	16767	90	19.5	-24.6	NP_052273		5' arm      3' arm
1293	-	17833	90	19.5	-24.12	NP_052273		5' arm      3' arm
1295	-	18875	89	19.5	-24.2	NP_052273		5' arm      3' arm
1294	-	18690	88	23	-22.2	NP_052273		5' arm      3' arm
1296	-	27184	89	19	-23.3	NP_052289		5' arm      3' arm
1278	-	2786	89	20	-22.4	NP_052251		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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