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GenBank Identifier | RefSeq Acc. | Name |
9634055 | NC_001317.1 | Enterobacteria phage 186 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
1284 | - | 6319 | 86 | 19.5 | -20.1 | NP_052254 | 5' arm 3' arm | ||
1259 | + | 6258 | 85 | 19 | -25.3 | NP_052254 | 5' arm 3' arm | ||
1285 | - | 7955 | 90 | 22.5 | -24.2 | NP_052258 | 5' arm 3' arm | ||
1260 | + | 8193 | 89 | 25.5 | -21.5 | NP_052259 | 5' arm 3' arm | ||
1286 | - | 8481 | 87 | 19 | -24.3 | NP_052259 | 5' arm 3' arm | ||
1287 | - | 9607 | 89 | 20 | -23.1 | NP_052262 | 5' arm 3' arm | ||
1261 | + | 10910 | 90 | 21 | -19.5 | NP_052265 | 5' arm 3' arm | ||
1262 | + | 11244 | 86 | 19 | -22.4 | NP_052265 | 5' arm 3' arm | ||
1263 | + | 14609 | 89 | 22 | -28.9 | NP_052269 | 5' arm 3' arm | ||
1264 | + | 15435 | 90 | 20 | -21.6 | NP_052270 | 5' arm 3' arm | ||
1265 | + | 15567 | 89 | 22.5 | -25.8 | NP_052270 | 5' arm 3' arm | ||
1290 | - | 16240 | 88 | 22 | -22.8 | NP_052271 | 5' arm 3' arm | ||
1291 | - | 16389 | 87 | 20 | -25.6 | NP_052272 | 5' arm 3' arm | ||
1268 | + | 18174 | 90 | 24.5 | -20.6 | NP_052273 | 5' arm 3' arm | ||
1292 | - | 16767 | 90 | 19.5 | -24.6 | NP_052273 | 5' arm 3' arm | ||
1293 | - | 17833 | 90 | 19.5 | -24.12 | NP_052273 | 5' arm 3' arm | ||
1295 | - | 18875 | 89 | 19.5 | -24.2 | NP_052273 | 5' arm 3' arm | ||
1294 | - | 18690 | 88 | 23 | -22.2 | NP_052273 | 5' arm 3' arm | ||
1267 | + | 18034 | 89 | 23 | -23.5 | NP_052273 | 5' arm 3' arm | ||
1266 | + | 17167 | 88 | 19.5 | -19.6 | NP_052273 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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