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GenBank Identifier | RefSeq Acc. | Name |
9625433 | NC_001335.1 | Mycobacterium phage L5 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
1332 | + | 1772 | 88 | 20 | -24.3 | NP_039669 | 5' arm 3' arm | ||
1333 | + | 2344 | 90 | 21 | -31.82 | NP_039671 | 5' arm 3' arm | ||
1334 | + | 4061 | 89 | 20 | -22.9 | NP_039673 | 5' arm 3' arm | ||
1335 | + | 4157 | 90 | 19.5 | -29.2 | 5' arm 3' arm | |||
1336 | + | 5258 | 88 | 20.5 | -24.7 | NP_039674 | 5' arm 3' arm | ||
1337 | + | 5932 | 90 | 20.5 | -27 | NP_039676 | 5' arm 3' arm | ||
1338 | + | 6255 | 89 | 19 | -22.6 | NP_039676 | 5' arm 3' arm | ||
1339 | + | 6390 | 90 | 21 | -29.6 | NP_039676 | 5' arm 3' arm | ||
1340 | + | 6861 | 87 | 19 | -23.7 | NP_039677 | 5' arm 3' arm | ||
1341 | + | 7071 | 89 | 19 | -21.3 | NP_039677 | 5' arm 3' arm | ||
1342 | + | 7845 | 90 | 22.5 | -19.9 | NP_039677 | 5' arm 3' arm | ||
1343 | + | 8966 | 87 | 23 | -20.2 | NP_039678 | 5' arm 3' arm | ||
1344 | + | 10276 | 89 | 19 | -30.3 | NP_039679 | 5' arm 3' arm | ||
1345 | + | 10896 | 88 | 20 | -25.2 | NP_039680 | 5' arm 3' arm | ||
1346 | + | 11114 | 88 | 20.5 | -20.4 | NP_039680 | 5' arm 3' arm | ||
1347 | + | 12082 | 88 | 20 | -28.2 | NP_039681 | 5' arm 3' arm | ||
1348 | + | 12430 | 84 | 21 | -20.1 | NP_039682 | 5' arm 3' arm | ||
1349 | + | 12604 | 89 | 20 | -29.1 | NP_039683 | 5' arm 3' arm | ||
1350 | + | 12975 | 88 | 19.5 | -23.1 | 5' arm 3' arm | |||
1351 | + | 13064 | 90 | 20 | -23.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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