miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32594	-	147301	84	19.5	-21.9	YP_249755		5' arm      3' arm
32593	-	140582	90	24	-32.1			5' arm      3' arm
32592	-	136301	90	19	-28	YP_249745		5' arm      3' arm
32591	-	124947	88	24.5	-20.2	YP_249731		5' arm      3' arm
32590	-	109700	89	29	-27.3	YP_249714		5' arm      3' arm
32589	-	67506	89	22	-23.1	YP_249673		5' arm      3' arm
32588	-	47812	90	20.5	-20.4			5' arm      3' arm
32587	-	4712	89	20.5	-20.1	YP_249608		5' arm      3' arm
32586	+	140646	90	20.5	-20.4			5' arm      3' arm
32585	+	140527	87	20.5	-21.7			5' arm      3' arm
32584	+	136732	88	23.5	-21.9			5' arm      3' arm
32583	+	133689	89	21	-19.7	YP_249742		5' arm      3' arm
32582	+	130254	87	21.5	-25.5	YP_249738		5' arm      3' arm
32581	+	126248	88	24.5	-20.6	YP_249734		5' arm      3' arm
32580	+	124859	88	24.5	-20	YP_249731		5' arm      3' arm
32579	+	118916	88	21	-26	YP_249697		5' arm      3' arm
32578	+	118809	90	21.5	-27.6	YP_249725		5' arm      3' arm
32577	+	114801	88	20	-24			5' arm      3' arm
32576	+	106042	86	23.5	-19.91	YP_249711		5' arm      3' arm
32575	+	105870	88	22.5	-21.4	YP_249711		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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