miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
32347	-	25619	88	20.5	-19.41	YP_239297		5' arm      3' arm
32303	+	8695	90	20.5	-19.6	YP_239278		5' arm      3' arm
32333	-	2603	88	20.5	-19.7	YP_239272		5' arm
32299	+	6871	87	20.5	-19.7	YP_239276		5' arm      3' arm
32359	-	51095	89	19	-19.7	YP_239338		5' arm      3' arm
32357	-	46415	89	20	-19.7	YP_239324		5' arm      3' arm
32340	-	9752	89	24	-19.7	YP_239279		5' arm      3' arm
32307	+	14055	82	20.5	-19.8	YP_239287		5' arm      3' arm
32338	-	8554	85	19.5	-19.8	YP_239278		5' arm      3' arm
32317	+	26543	89	22	-19.9	YP_239298		5' arm      3' arm
32334	-	3085	89	19.5	-20	YP_239272		5' arm      3' arm
32310	+	17731	85	21	-20.1	YP_239291		5' arm      3' arm
32361	-	52419	89	21	-20.4	YP_239344		3' arm
32331	+	55196	84	19.5	-20.4			5' arm      3' arm
32344	-	21354	89	22	-20.7	YP_239291		5' arm      3' arm
32346	-	22194	89	19	-20.7	YP_239292		5' arm      3' arm
32356	-	43680	88	21.5	-20.7	YP_239317		3' arm
32315	+	22886	90	20	-20.7	YP_239292		5' arm      3' arm
32302	+	8596	90	19.5	-20.8	YP_239278		5' arm      3' arm
32322	+	34244	89	19.5	-21	YP_239308		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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